BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A05LP1|AL428310
(680 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1283 0.0
>3x_Contig1619
Length = 7770
Score = 1283 bits (639), Expect = 0.0
Identities = 664/679 (97%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 1 ttacatatattattttataatatatttataataaatatttataatataavtnrcatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 842 ttacatatattattttataatatatttataataaatatttataatataaataacatgcaa 901
Query: 61 btagkattagcagcdaaatatattggagcaggtatctcaacaattggattattaggagca 120
||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ttagtattagcagctaaatatattggagcaggtatctcaacaattggattattaggagca 961
Query: 121 ggtattggtattgcnatcgtattctcagccttaattcaaggagtatcaagaaacccatca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ggtattggtattgctatcgtattctcagccttaattcaaggagtatcaagaaacccatca 1021
Query: 181 ttaaaagatacattattcccattcgcaattttaggataaagagtgagtcctatttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 ttaaaagatacattattcccattcgcaattttaggataaagagtgagtcctatttttctt 1081
Query: 241 atttatcccataatcttattaagcattatgggatataattagaatataaaattgggtgaa 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atttatcccataatcttattaag-attatgggatataattagaatataaaattgggtgaa 1140
Query: 301 ttgcaagaaactcctagtatttaataattatattamatatggacaatttgcagcgaagtt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1141 ttgcaagaaactcctagtatttaataattatattaaatatggacaatttgcagcgaagtt 1200
Query: 361 tataacaacctatattatattatyatmtmatasscccvcgcggctcgtccaaccctacgg 420
||||||||||||||||||||||| || | ||| ||| ||||||||||||||||||||||
Sbjct: 1201 tataacaacctatattatattattatataataaccccacgcggctcgtccaaccctacgg 1260
Query: 421 ttagacgatgccgcgtggggagttataaaaacgttcaacgactagataatgagttaggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttagacgatgccgcgtggggagttataaaaacgttcaacgactagataatgagttaggtt 1320
Query: 481 aacaataatttatccacgagcgcccaatatcaaatagattatatttgataatgacatagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 aacaataatttatccacgagcgcccaatatcaaatagattatatttgataatgacatagt 1380
Query: 541 ctgaacaatatagaaatatattgagctaatatattaaataaatattaggccaacatatac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctgaacaatatagaaatatattgagctaatatattaaataaatattaggccaacatatac 1440
Query: 601 agttgctttatcagaagctacaggattattctgtttaatgatttcattcttattattata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 agttgctttatcagaagctacaggattattctgtttaatgatttcattcttattattata 1500
Query: 661 cgctgtataataataatat 679
|||||||||||||||||||
Sbjct: 1501 cgctgtataataataatat 1519
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6255
Number of Sequences: 1807
Number of extensions: 6255
Number of successful extensions: 202
Number of sequences better than 1.0e-20: 1
length of query: 680
length of database: 10,358,551
effective HSP length: 16
effective length of query: 664
effective length of database: 10,329,639
effective search space: 6858880296
effective search space used: 6858880296
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)